David Mu, Ph.D.

Associate Professor
Department of Microbiology and Molecular Cell Biology
Leroy T. Canoles Jr. Cancer Research Center
Harry T. Lester Hall 420
651 Colley Avenue
Norfolk, Virginia 23501
Office: (757) 446-0373
Lab: (757) 446-0527
Email: MuD@evms.com
Mu CV
Teaching:
- Biomedical Sciences Program
Education
- Ph.D. – University of California at Berkeley
Adviser: Dr. Judith P. Klinman - Postdoctoral Fellow – University of North Carolina at Chapel Hill
Adviser: Dr. Aziz Sancar
Professional Positions
2012-Present
- Associate Professor
Eastern Virginia Medical School
Department of Microbiology & Molecular Cell Biology
2008 - 2012
- Associate Professor
Penn State University College of Medicine
Departments of Pathology and Biochemistry and Molecular Biology
2004 - 2008
- Research Investigator
Cold Spring Harbor Laboratory
1998 - 2004
- Scientist
The Cancer Genomics Division, Tularik Inc.
Lab Members
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Shao-Chiang Michael Lai, Ph.D., Postdoc
Phone: (757) 446-0527 Email: lais@evms.edu |
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Kaitlin Helsley, B.S., Research Technician
Phone: (757) 446-0527 Email: helslekr@evms.edu |
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Lauren Wood, Ph.D., Postdoc
Phone: (757) 446-0527 Email: woodlw@evms.edu |
Research Interests
Keywords: MicroRNA biology, Cancer Research, Lung cancer and biology, Cancer genomics, Molecular study of oncogene mechanism, Oncogenic signaling, Cancer cell metabolism, and Finding new uses of old drugs.
I. MicroRNAs and mechanism of lung cancer genes
Oncogenes activated via gene amplification have a proven track record of being amenable to invention of new anti-cancer therapies. We and others discovered a recurrent amplified region in lung cancer genomes. This amplicon contains the TTF-1 gene (thyroid transcription factor 1 or known as NKX2-1) which is essential for lung development and morphogenesis. We are interested in mapping the interconnection between TTF-1 and microRNAs to afford novel entry points to investigate TTF-1-linked lung biology. Using a variety of experimental approaches, our laboratory is the first to discover the two types of TTF-1-linked microRNAs – an upstream microRNA that directly regulates TTF-1 expression and downstream microRNAs that are regulated by TTF-1. Currently, we are investigating the biology of these interactions between microRNAs and a lung cancer/development gene.
II. New uses of old drugs
In order to minimize the exorbitant costs and risks of de novo drug discovery and development, our strategy is to use off-patent marketed small molecule drugs as the starting point of drug discovery efforts, i.e. repurposing/repositioning an old drug for a new use. Medications that have come off patent are affordable for patients and have well documented biological, toxicological, and pharmacokinetic studies associated with them. Consequently, functional screening of such “old drugs” may readily yield chemicals for immediate clinical trials. Furthermore, “off-label” prescribing allows physicians to innovate with treatments based on emerging research data. Towards this end, we are conducting a multitude of cell-based screens to uncover new utilities of “old drugs” in fighting cancers. This line of research entails a highly translational goal in sight. Although cancer is the focal point of our work, our approach is in principle transplantable and could be used to discover novel therapeutic strategies to treat other diseases. There are approximately 9990 drugs known to clinical medicine. Each drug should be considered an information-rich entity that merits exploration especially as treatment of orphan diseases.
Original Research Articles (peer-reviewed)
| 1. | Lee G, Peng S, Lush S, Mu D, Liu R. Reaction of iron-.eta.1-dienyl complexes with dienophiles. X-ray structures of the [4 + 2] cycloaddition adducts. Organometallics. 1988 ; 7:1155–1161. |
| 2. | Liu F, Mu D, Lee G, Peng S, Liu R. Preparation of Molybdenum-h3- Pentadienyl Complexes: Structural Characterization of a Delocalized Pentadienyl Ligand in Anti-h3 Geometry. Organometallics. 1989 ; 8:402-407. |
| 3. | Tsing I, Mu D, Lee G, Peng S, Liu R. Preparation and Properties of Molybdenum-Pentadienyl Complexes: A Facile h5<=>h3 Reversible Interconversion for a Pentadienyl Ligands. Organometallics. 1989 ; 8:2248-2252. |
| 4. | Janes SM, Mu D, Wemmer D, Smith AJ, Kaur S, Maltby D, Burlingame AL, Klinman JP. A new redox cofactor in eukaryotic enzymes: 6-hydroxydopa at the active site of bovine serum amine oxidase. Science. 1990 May 25;248(4958):981-7. PubMed PMID: 2111581. Cited in PMC Related citations |
| 5. | Brown DE, McGuirl MA, Dooley DM, Janes SM, Mu D, Klinman JP. The organic functional group in copper-containing amine oxidases. Resonance Raman spectra are consistent with the presence of topa quinone (6-hydroxydopa quinone) in the active site. J Biol Chem. 1991 Mar 5;266(7):4049-51. PubMed PMID: 1900285. Cited in PMC Related citations |
| 6. |
Mu D, Janes SM, Smith AJ, Brown DE, Dooley DM, Klinman JP. |
| 7. | Mu D, Medzihradszky KF, Adams GW, Mayer P, Hines WM, Burlingame AL, Smith AJ, Cai D, Klinman JP. Primary structures for a mammalian cellular and serum copper amine oxidase. J Biol Chem. 1994 Apr 1;269(13):9926-32. PubMed PMID: 8144587. Cited in PMC Related citations |
| 8. | Mu D, Bertrand-Burggraf E, Huang JC, Fuchs RP, Sancar A, Fuchs BP. Human and E.coli excinucleases are affected differently by the sequence context of acetylaminofluorene-guanine adduct. Nucleic Acids Res. 1994 Nov 25;22(23):4869-71. Erratum in: Nucleic Acids Res 1995 Feb 11;23(3):540. PubMed PMID: 7702657; PubMed Central PMCID: PMC523749. Free full text Cited in PMC Related citations |
| 9. | Mu D, Park CH, Matsunaga T, Hsu DS, Reardon JT, Sancar A. Reconstitution of human DNA repair excision nuclease in a highly defined system. J Biol Chem. 1995 Feb 10;270(6):2415-8. PubMed PMID: 7852297. Cited in PMC Related citations |
| 10. | Park CH, Mu D, Reardon JT, Sancar A. The general transcription-repair factor TFIIH is recruited to the excision repair complex by the XPA protein independent of the TFIIE transcription factor. J Biol Chem. 1995 Mar 3;270(9):4896-902. PubMed PMID: 7876263. Cited in PMC Related citations |
| 11. | Matsunaga T, Mu D, Park CH, Reardon JT, Sancar A. Human DNA repair excision nuclease. Analysis of the roles of the subunits involved in dual incisions by using anti-XPG and anti-ERCC1 antibodies. J Biol Chem. 1995 Sep 1;270(35):20862-9. PubMed PMID: 7657672. Cited in PMC Related citations |
| 12. | Mu D, Hsu DS, Sancar A. Reaction mechanism of human DNA repair excision nuclease. J Biol Chem. 1996 Apr 5;271(14):8285-94. PubMed PMID: 8626523. Cited in PMC Related citations |
| 13. | Matsunaga T, Park CH, Bessho T, Mu D, Sancar A. Replication protein A confers structure-specific endonuclease activities to the XPF-ERCC1 and XPG subunits of human DNA repair excision nuclease. J Biol Chem. 1996 May 10;271(19):11047-50. PubMed PMID: 8626644. Cited in PMC Related citations |
| 14. | Kazantsev A, Mu D, Nichols AF, Zhao X, Linn S, Sancar A. Functional complementation of xeroderma pigmentosum complementation group E by replication protein A in an in vitro system. Proc Natl Acad Sci U S A. 1996 May 14;93(10):5014-8. PubMed PMID: 8643521; PubMed Central PMCID: PMC39398. Free full text Cited in PMC Related citations |
| 15. | Zamble DB, Mu D, Reardon JT, Sancar A, Lippard SJ. Repair of cisplatin--DNA adducts by the mammalian excision nuclease. Biochemistry. 1996 Aug 6;35(31):10004-13. PubMed PMID: 8756462. Cited in PMC Related citations |
| 16. | Reardon JT, Mu D, Sancar A. Overproduction, purification, and characterization of the XPC subunit of the human DNA repair excision nuclease. J Biol Chem. 1996 Aug 9;271(32):19451-6. PubMed PMID: 8702634. Cited in PMC Related citations |
| 17. | Mu D, Tursun M, Duckett DR, Drummond JT, Modrich P, Sancar A. Recognition and repair of compound DNA lesions (base damage and mismatch) by human mismatch repair and excision repair systems. Mol Cell Biol. 1997 Feb;17(2):760-9. PubMed PMID: 9001230; PubMed Central PMCID: PMC231802. Free full text Cited in PMC Related citations |
| 18. | Mu D, Sancar A. Model for XPC-independent transcription-coupled repair of pyrimidine dimers in humans. J Biol Chem. 1997 Mar 21;272(12):7570-3. PubMed PMID: 9065408. Cited in PMC Related citations |
| 19. | Mu D, Wakasugi M, Hsu DS, Sancar A. Characterization of reaction intermediates of human excision repair nuclease. J Biol Chem. 1997 Nov 14;272(46):28971-9. PubMed PMID: 9360969. Cited in PMC Related citations |
| 20. |
Bessho T, Mu D, Sancar A. |
| 21. |
Mu D, Bessho T, Nechev LV, Chen DJ, Harris TM, Hearst JE, Sancar A. |
| 22. |
Mu D, Chen L, Zhang X, See LH, Koch CM, Yen C, Tong JJ, Spiegel L, Nguyen KC, Servoss A, Peng Y, Pei L, Marks JR, Lowe S, Hoey T, Jan LY, McCombie WR, Wigler MH, Powers S. |
| 23. |
Pei L, Wiser O, Slavin A, Mu D, Powers S, Jan LY, Hoey T. |
| 24. | He L, Thomson JM, Hemann MT, Hernando-Monge E, Mu D, Goodson S, Powers S, Cordon-Cardo C, Lowe SW, Hannon GJ, Hammond SM. A microRNA polycistron as a potential human oncogene. Nature. 2005 Jun 9;435(7043):828-33. PubMed PMID: 15944707. Cited in PMC Related citations |
| 25. | Galteland E, Sivertsen EA, Svendsrud DH, Smedshammer L, Kresse SH, Meza-Zepeda LA, Myklebost O, Suo Z, Mu D, Deangelis PM, Stokke T. Translocation t(14;18) and gain of chromosome 18/BCL2: effects on BCL2 expression and apoptosis in B-cell non-Hodgkin's lymphomas. Leukemia. 2005 Dec;19(12):2313-23. PubMed PMID: 16193090. Cited in PMC Related citations |
| 26. | Sivertsen EA, Galteland E, Mu D, Holte H, Meza-Zepeda L, Myklebost O, Patzke S, Smeland EB, Stokke T. Gain of chromosome 6p is an infrequent cause of increased PIM1 expression in B-cell non-Hodgkin's lymphomas. Leukemia. 2006 Mar;20(3):539-42. PubMed PMID: 16437153. Cited in PMC Related citations |
| 27. | Zender L, Spector MS, Xue W, Flemming P, Cordon-Cardo C, Silke J, Fan ST, Luk JM, Wigler M, Hannon GJ, Mu D, Lucito R, Powers S, Lowe SW. Identification and validation of oncogenes in liver cancer using an integrative oncogenomic approach. Cell. 2006 Jun 30;125(7):1253-67. PubMed PMID: 16814713; PubMed Central PMCID: PMC3026384. Free full text Cited in PMC Related citations |
| 28. | Geurts AM, Collier LS, Geurts JL, Oseth LL, Bell ML, Mu D, Lucito R, Godbout SA, Green LE, Lowe SW, Hirsch BA, Leinwand LA, Largaespada DA. Gene mutations and genomic rearrangements in the mouse as a result of transposon mobilization from chromosomal concatemers. PLoS Genet. 2006 Sep 29;2(9):e156. Epub 2006 Aug 3. PubMed PMID: 17009875; PubMed Central PMCID: PMC1584263. Free full text Cited in PMC Related citations |
| 29. | Pelham RJ, Rodgers L, Hall I, Lucito R, Nguyen KC, Navin N, Hicks J, Mu D, Powers S, Wigler M, Botstein D. Identification of alterations in DNA copy number in host stromal cells during tumor progression. Proc Natl Acad Sci U S A. 2006 Dec 26;103(52):19848-53. Epub 2006 Dec 13. PubMed PMID: 17167050; PubMed Central PMCID: PMC1698871. Free full text Cited in PMC Related citations |
| 30. | MacPherson D, Conkrite K, Tam M, Mukai S, Mu D, Jacks T. Murine bilateral retinoblastoma exhibiting rapid-onset, metastatic progression and N-myc gene amplification. EMBO J. 2007 Feb 7;26(3):784-94. Epub 2007 Jan 18. PubMed PMID: 17235288; PubMed Central PMCID: PMC1794380. Free full text Cited in PMC Related citations |
| 31. | Karni R, de Stanchina E, Lowe SW, Sinha R, Mu D, Krainer AR. The gene encoding the splicing factor SF2/ASF is a proto-oncogene. Nat Struct Mol Biol. 2007 Mar;14(3):185-93. Epub 2007 Feb 18. PubMed PMID: 17310252. Cited in PMC Related citations |
| 32. | Scott CL, Gil J, Hernando E, Teruya-Feldstein J, Narita M, Martínez D, Visakorpi T, Mu D, Cordon-Cardo C, Peters G, Beach D, Lowe SW. Role of the chromobox protein CBX7 in lymphomagenesis. Proc Natl Acad Sci U S A. 2007 Mar 27;104(13):5389-94. Epub 2007 Mar 20. PubMed PMID: 17374722; PubMed Central PMCID: PMC1828941. Free full text Cited in PMC Related citations |
| 33. | Kendall J, Liu Q, Bakleh A, Krasnitz A, Nguyen KC, Lakshmi B, Gerald WL, Powers S, Mu D. Oncogenic cooperation and coamplification of developmental transcription factor genes in lung cancer. Proc Natl Acad Sci U S A. 2007 Oct 16;104(42):16663-8. Epub 2007 Oct 9. PubMed PMID: 17925434; PubMed Central PMCID: PMC2034240. Free full text Cited in PMC Related citations |
| 34. | Miao J, Mu D, Ergel B, Singavarapu R, Duan Z, Powers S, Oliva E, Orsulic S. Hepsin colocalizes with desmosomes and induces progression of ovarian cancer in a mouse model. Int J Cancer. 2008 Nov 1;123(9):2041-7. doi: 10.1002/ijc.23726. PubMed PMID: 18726901; PubMed Central PMCID: PMC2653430. Free full text Cited in PMC Related citations |
| 35. | Sangha N, Wu R, Kuick R, Powers S, Mu D, Fiander D, Yuen K, Katabuchi H, Tashiro H, Fearon ER, Cho KR. Neurofibromin 1 (NF1) defects are common in human ovarian serous carcinomas and co-occur with TP53 mutations. Neoplasia. 2008 Dec;10(12):1362-72, following 1372. PubMed PMID: 19048115; PubMed Central PMCID: PMC2586687. Free full text Cited in PMC Related citations |
| 36. |
Hsu DS, Acharya CR, Balakumaran BS, Riedel RF, Kim MK, Stevenson M, Tuchman S, Mukherjee S, Barry W, Dressman HK, Nevins JR, Powers S, Mu D, Potti A. |
| 37. | Oliver TG, Mercer KL, Sayles LC, Burke JR, Mendus D, Lovejoy KS, Cheng MH, Subramanian A, Mu D, Powers S, Crowley D, Bronson RT, Whittaker CA, Bhutkar A, Lippard SJ, Golub T, Thomale J, Jacks T, Sweet-Cordero EA. Chronic cisplatin treatment promotes enhanced damage repair and tumor progression in a mouse model of lung cancer. Genes Dev. 2010 Apr 15;24(8):837-52. doi: 10.1101/gad.1897010. PubMed PMID: 20395368; PubMed Central PMCID: PMC2854397. Free full text Cited in PMC Related citations |
| 38. | Conkrite K, Sundby M, Mukai S, Thomson JM, Mu D, Hammond SM, MacPherson D. miR-17~92 cooperates with RB pathway mutations to promote retinoblastoma. Genes Dev. 2011 Aug 15;25(16):1734-45. doi: 10.1101/gad.17027411. Epub 2011 Aug 4. PubMed PMID: 21816922; PubMed Central PMCID: PMC3165937. Free full text Cited in PMC Related citations |
| 39. | Qi J, Rice SJ, Salzberg AC, Runkle EA, Liao J, Zander DS, Mu D. MiR-365 regulates lung cancer and developmental gene thyroid transcription factor 1. Cell Cycle. 2012 Jan 1;11(1):177-86. doi: 10.4161/cc.11.1.18576. Epub 2012 Jan 1. PubMed PMID: 22185756; PubMed Central PMCID: PMC3272236. Free full text Related citations |
| 40. | Conkrite K, Sundby M, Mu D, Mukai S, MacPherson D. Cooperation between Rb and Arf in suppressing mouse retinoblastoma. J Clin Invest. 2012 May 1;122(5):1726-33. doi: 10.1172/JCI61403. Epub 2012 Apr 9. PubMed PMID: 22484813; PubMed Central PMCID: PMC3336990. Free full text Cited in PMC Related citations |
| 41. | Runkle EA, Rice SJ, Qi J, Masser D, Antonetti DA, Winslow MM, Mu D. Occludin is a direct target of thyroid transcription factor-1 (TTF-1/NKX2-1). J Biol Chem. 2012 Aug 17;287(34):28790-801. doi: 10.1074/jbc.M112.367987. Epub 2012 Jul 2. PubMed PMID: 22761434; PubMed Central PMCID: PMC3436544. Related citations |
| 42. |
Cohen-Eliav M, Golan-Gerstl R, Siegfried Z, Andersen CL, Thorsen K, Ørntoft TF, Mu D, Karni R. |
| 43. |
Rice SJ, Lai SC, Wood LW, Helsley KR, Runkle EA, Winslow MM, Mu D. |
Review Articles and Book Chapters
| 1. | Klinman JP, Mu D. Quinoenzymes in biology. Annu Rev Biochem. 1994;63:299-344. Review. PubMed PMID: 7979241. Cited in PMC Related citations |
| 2. | Mu D, Klinman JP. Cloning of mammalian topa quinone-containing enzymes. Methods Enzymol. 1995;258:114-22. PubMed PMID: 8524143. Related citations |
| 3. | Mu D, Sancar A. DNA excision repair assays. Prog Nucleic Acid Res Mol Biol. 1997;56:63-81. Review. PubMed PMID: 9187051. Related citations |
| 4 | Zhao X, Mu D. (6-4) photolyase: light-dependent repair of DNA damage. Histol Histopathol. 1998 Oct;13(4):1179-82. Review. PubMed PMID: 9810509. Cited in PMC Related citations |
| 5. | Powers S, Mu D. Genetic similarities between organogenesis and tumorigenesis of the lung. Cell Cycle. 2008 Jan 15;7(2):200-4. Epub 2007 Nov 5. Review. PubMed PMID: 18256532. Cited in PMC Related citations |
| 6. | Qi J, Mu D. MicroRNAs and lung cancers: from pathogenesis to clinical implications. Front Med. 2012 Jun;6(2):134-55. doi: 10.1007/s11684-012-0188-4. Epub 2012 Apr 18. Review. PubMed PMID: 22528868. Related citations |
Patent Applications
| 1. | Amplified cancer gene hepsin. US Patent application number: 20030049645. Filed 2/12/2002. |
| 2. | AMPLIFIED ONCOGENES AND THEIR INVOLVEMENT IN CANCER. US Patent application number: 20030092042. Filed 8/27/2002. |
| 3. | AMPLIFICATION AND OVEREXPRESSION OF ONCOGENES. US Patent application number: 20040005615. Filed 5/22/2003. |
| 4. | GENE AMPLIFICATION AND OVEREXPRESSION IN CANCER. US Patent application number: 20050026194. Filed 6/15/2004. |
| 5. | KCNB: A NOVEL POTASSIUM CHANNEL PROTEIN. US Patent application number: 20080234470. Filed 1/3/2008. |
Patents Granted
| 1. | Diagnosis and treatment of cancer using mammalian pellino polypeptides and polynucleotides. United States Patent # 7,115,368, issued 10/3/2006. |
| 2. | Nucleic acid encoding KCNB potassium channel. United States Patent # 7,462,465, issued 12/9/2008. |




