SELDI Protein Profiling Studies

This Web site has been constructed to provide public access to data generated by the BDL, allowing investigators to analyze the raw and/or processed data using their own analysis algorithms. Although there is no obligation for accessing the data, the BDL staff would be interested in learning how other peak picking/alignment and classifier programs performed using the data.

• Overview of the SELDI Process
• Overview of the PeakMiner Software (PDF format)
• Overview of the Decision Tree Algorithm (PDF format)
• Overview of the Boosted Decision Tree Algorithm (PDF format)

1. Prostate Cancer
   
   1. Study published in CANCER RESEARCH 62(13):3609-3614, July 1, 2002
      • Study population: 167 prostate cancer, 77 benign prostate hyperplasia and 82 age-matched normals
      • Chip:IMAC-Cu metal binding (Manual Processing)
      • FTP Link to "TOF" Data
      • FTP Link to "PROCESSED" Data
   2. Study published in CLINICAL CHEMISTRY
      • Study population: 167 prostate cancer, 77 benign prostate hyperplasia and 82 age-matched normals
      • Chip: IMAC-Cu metal binding (Manual Processing)
      • FTP Link to "TOF" Data
      • FTP Link to "PROCESSED" Data

For more information about the SELDI profiling studies at the VPC, please contact:

George L. Wright Jr., PhD
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